bsb#
- bsb package
- Subpackages
- bsb.cli package
- bsb.config package
- bsb.topology package
- bsb.morphologies package
- bsb.placement package
- bsb.connectivity package
- bsb.simulation package
- Submodules
- bsb.simulation.simulation module
- bsb.simulation.adapter module
- bsb.simulation.cell module
- bsb.simulation.component module
- bsb.simulation.connection module
- bsb.simulation.device module
- bsb.simulation.parameter module
- bsb.simulation.results module
- bsb.simulation.targetting module
- Module contents
- bsb.services package
- bsb.storage package
- Submodules
- bsb.core module
ReportListener
Scaffold
Scaffold.after_connectivity
Scaffold.after_placement
Scaffold.attr
Scaffold.cell_types
Scaffold.clear()
Scaffold.clear_connectivity()
Scaffold.clear_placement()
Scaffold.compile()
Scaffold.configuration
Scaffold.connectivity
Scaffold.create_entities()
Scaffold.create_job_pool()
Scaffold.files
Scaffold.get_cell_types()
Scaffold.get_config_diagram()
Scaffold.get_connectivity()
Scaffold.get_connectivity_set()
Scaffold.get_connectivity_sets()
Scaffold.get_dependency_pipelines()
Scaffold.get_placement()
Scaffold.get_placement_of()
Scaffold.get_placement_set()
Scaffold.get_placement_sets()
Scaffold.get_simulation()
Scaffold.get_storage_diagram()
Scaffold.is_main_process()
Scaffold.is_worker_process()
Scaffold.merge()
Scaffold.morphologies
Scaffold.network
Scaffold.partitions
Scaffold.place_cells()
Scaffold.placement
Scaffold.regions
Scaffold.register_listener()
Scaffold.remove_listener()
Scaffold.require_connectivity_set()
Scaffold.resize()
Scaffold.run_after_connectivity()
Scaffold.run_after_placement()
Scaffold.run_connectivity()
Scaffold.run_pipelines()
Scaffold.run_placement()
Scaffold.run_placement_strategy()
Scaffold.run_simulation()
Scaffold.simulations
Scaffold.storage
Scaffold.storage_cfg
from_storage()
- bsb.cell_types module
CellType
PlacementIndications
PlacementIndications.count
PlacementIndications.count_ratio
PlacementIndications.density
PlacementIndications.density_key
PlacementIndications.density_ratio
PlacementIndications.geometry
PlacementIndications.get_node_name()
PlacementIndications.morphologies
PlacementIndications.planar_density
PlacementIndications.radius
PlacementIndications.relative_to
PlacementIndications.scaffold
Plotting
- bsb.exceptions module
AdapterError
AllenApiError
ArborError
AttributeMissingError
BootError
CLIError
CastConfigurationError
CastError
CfgReferenceError
ChunkError
CircularMorphologyError
ClassError
ClassMapMissingError
CodeImportError
CommandError
CompartmentError
CompilationError
ConfigTemplateNotFoundError
ConfigurationError
ConfigurationFormatError
ConfigurationWarning
ConnectivityError
ConnectivityWarning
ContinuityError
DataNotFoundError
DataNotProvidedError
DatasetExistsError
DatasetNotFoundError
DependencyError
DeviceConnectionError
DistributionCastError
DistributorError
DryrunError
DynamicClassError
DynamicClassInheritanceError
DynamicObjectNotFoundError
EmptyBranchError
EmptySelectionError
EmptyVoxelSetError
ExternalSourceError
GatewayError
IncompleteExternalMapError
IncompleteMorphologyError
IndicatorError
InputError
IntersectionDataNotFoundError
InvalidReferenceError
JobCancelledError
JobPoolContextError
JobPoolError
JobSchedulingError
JsonImportError
JsonParseError
JsonReferenceError
LayoutError
MissingActiveConfigError
MissingMorphologyError
MissingSourceError
MorphologyDataError
MorphologyError
MorphologyRepositoryError
MorphologyWarning
NestConnectError
NestError
NestKernelError
NestModelError
NestModuleError
NeuronError
NoReferenceAttributeSignal
NodeNotFoundError
NoneReferenceError
OptionError
PackageRequirementWarning
PackingError
PackingWarning
ParallelIntegrityError
ParameterError
ParserError
PlacementError
PlacementRelationError
PlacementWarning
PluginError
QuiverFieldWarning
ReadOnlyOptionError
RedoError
ReificationError
RequirementError
ScaffoldError
ScaffoldWarning
SelectorError
SimulationError
SourceQualityError
StorageError
TopologyError
TransmitterError
TreeError
TypeHandlingError
UnfitClassCastError
UnknownConfigAttrError
UnknownGIDError
UnknownStorageEngineError
UnmanagedPartitionError
UnresolvedClassCastError
VoxelSetError
- bsb.exceptions module
- bsb.option module
- bsb.options module
- bsb.plugins module
- bsb.postprocessing module
- bsb.reporting module
- bsb.trees module
- bsb.voxels module
BoxTree
VoxelData
VoxelSet
VoxelSet.as_boxes()
VoxelSet.as_boxtree()
VoxelSet.as_spatial_coords()
VoxelSet.bounds
VoxelSet.concatenate()
VoxelSet.coordinates_of()
VoxelSet.copy()
VoxelSet.crop()
VoxelSet.crop_chunk()
VoxelSet.data
VoxelSet.data_keys
VoxelSet.empty()
VoxelSet.equilateral
VoxelSet.fill()
VoxelSet.from_morphology()
VoxelSet.get_data()
VoxelSet.get_raw()
VoxelSet.get_size()
VoxelSet.get_size_matrix()
VoxelSet.has_data
VoxelSet.index_of()
VoxelSet.inside()
VoxelSet.is_empty
VoxelSet.of_equal_size
VoxelSet.one()
VoxelSet.raw
VoxelSet.regular
VoxelSet.resize()
VoxelSet.size
VoxelSet.snap_to_grid()
VoxelSet.unique()
VoxelSet.volume
- Module contents
- Subpackages